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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1451-1500 / 86044 show all
rpoplin-dv42INDELD1_5map_l100_m0_e0het
97.7076
97.2927
98.1261
84.3425
57516576112
18.1818
rpoplin-dv42INDELD1_5map_l100_m0_e0*
98.0857
97.9143
98.2578
84.7960
84518846156
40.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.6170
89.7959
97.7778
23.7288
4454411
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
75.0000
92.3077
63.1579
85.2713
1211275
71.4286
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
90.7895
92.0000
89.6104
65.7778
6966986
75.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.9248
99.8496
100.0000
40.4484
13282132800
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3492
99.1342
99.5652
27.5591
458445822
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
99.6717
99.6061
99.7373
45.9408
22769227863
50.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
99.7177
99.6321
99.8035
42.5670
406215406485
62.5000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
97.9798
98.4772
97.4874
60.2000
194319453
60.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
96.8547
94.6154
99.2026
23.5366
6153562255
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
94.5589
96.3636
92.8205
77.9037
371143622818
64.2857
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
96.3240
95.7792
96.8750
60.5835
11805211783826
68.4211
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.5630
99.4272
99.6991
49.6904
36452136451111
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7146
97.7227
99.7268
32.9363
145934146044
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
99.3679
99.4491
99.2868
52.6423
66793766824839
81.2500
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
99.3467
99.2253
99.4684
49.9176
1178392117876354
85.7143
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9907
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9991
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9214
99.9214
99.9214
54.3038
1017081016988
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.4054
95.8637
98.9975
72.4828
3941739544
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.7968
99.7563
99.8374
54.8306
1473436147362417
70.8333
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
99.8087
99.7595
99.8579
55.0764
2529861253003629
80.5556
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
81.2500
73.2394
91.2281
63.4615
52195255
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
80.8699
68.4318
98.8338
25.2723
33615533944
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_51to200het
59.9292
69.6296
52.6012
68.2569
9441918279
96.3415
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_51to200*
75.9055
69.1535
84.1187
50.6034
4822154829188
96.7033
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.2372
98.7305
99.7490
37.0877
71559271541818
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
97.1200
95.0044
99.3320
25.8972
654234465434443
97.7273
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
98.3381
99.4715
97.2303
50.5019
103525510356295278
94.2373
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
98.2676
97.9992
98.5375
41.6126
2404949124053357339
94.9580
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.9414
98.3852
99.5039
60.3844
822513582244136
87.8049
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.6089
93.9727
99.3973
31.2378
873156087415352
98.1132
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.8086
98.8224
96.8153
66.1962
1359516213589447406
90.8277
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.7633
97.2714
98.2602
58.6360
3055185730554541494
91.3124
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.8033
98.0989
99.5179
50.4556
557310855732724
88.8889
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.5181
93.7722
99.4296
26.3580
766450976704443
97.7273
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.1121
98.7732
95.5059
60.7561
82931038288390362
92.8205
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.3306
96.7640
97.9038
49.8941
2153072021531461429
93.0586