PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84651-84700 / 86044 show all
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
53.3333
100.0000
36.3636
63.3333
40477
100.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
15.5475
9.5361
42.0635
45.6897
37351537343
58.9041
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
10.6916
5.9524
52.4590
42.9907
10158322910
34.4828
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
5.7143
0.0000
0.0000
10165000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
34.8293
37.7778
32.3077
48.0000
1728214433
75.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
50.0000
026021
50.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
66.6667
03011
100.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
023000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00010
0.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
30.6087
21.6216
52.3810
47.5000
82911103
30.0000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
10.8696
6.2500
41.6667
53.8462
115571
14.2857
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
7.6923
0.0000
0.0000
112000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
70.5882
75.0000
66.6667
35.7143
62632
66.6667
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
04000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
02000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSmap_l100_m0_e0*
23.5294
18.1818
33.3333
68.4211
29244
100.0000
anovak-vgINDELI16_PLUSmap_l100_m0_e0het
22.2222
12.5000
100.0000
80.0000
17100
anovak-vgINDELI16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI16_PLUSmap_l100_m0_e0homalt
0.0000
0.0000
20.0000
64.2857
02144
100.0000
anovak-vgINDELI16_PLUSmap_l100_m1_e0*
21.6216
15.3846
36.3636
80.0000
422476
85.7143
anovak-vgINDELI16_PLUSmap_l100_m1_e0het
10.5263
5.5556
100.0000
90.9091
117100
anovak-vgINDELI16_PLUSmap_l100_m1_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
anovak-vgINDELI16_PLUSmap_l100_m1_e0homalt
34.2857
40.0000
30.0000
77.2727
23376
85.7143
anovak-vgINDELI16_PLUSmap_l100_m2_e0*
21.0526
15.3846
33.3333
82.3529
422486
75.0000
anovak-vgINDELI16_PLUSmap_l100_m2_e0het
10.5263
5.5556
100.0000
92.3077
117100
anovak-vgINDELI16_PLUSmap_l100_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
anovak-vgINDELI16_PLUSmap_l100_m2_e0homalt
32.4324
40.0000
27.2727
80.0000
23386
75.0000
anovak-vgINDELI16_PLUSmap_l100_m2_e1*
21.0526
15.3846
33.3333
82.3529
422486
75.0000
anovak-vgINDELI16_PLUSmap_l100_m2_e1het
10.5263
5.5556
100.0000
92.3077
117100
anovak-vgINDELI16_PLUSmap_l100_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
12000
anovak-vgINDELI16_PLUSmap_l100_m2_e1homalt
32.4324
40.0000
27.2727
80.0000
23386
75.0000
anovak-vgINDELI16_PLUSmap_l125_m0_e0*
22.2222
16.6667
33.3333
76.9231
15122
100.0000
anovak-vgINDELI16_PLUSmap_l125_m0_e0het
0.0000
100.0000
03000
anovak-vgINDELI16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI16_PLUSmap_l125_m0_e0homalt
0.0000
0.0000
33.3333
66.6667
02122
100.0000
anovak-vgINDELI16_PLUSmap_l125_m1_e0*
27.2727
20.0000
42.8571
80.5556
312344
100.0000