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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
651-700 / 86044 show all
raldana-dualsentieonSNPtvmap_l125_m2_e0homalt
99.7837
99.6676
99.9000
65.8746
599720599763
50.0000
raldana-dualsentieonSNPtvmap_l125_m1_e0homalt
99.7865
99.6758
99.8974
63.2172
584119584163
50.0000
raldana-dualsentieonSNPtvmap_l125_m0_e0homalt
99.6165
99.4147
99.8192
66.9456
220813220842
50.0000
raldana-dualsentieonSNPtvmap_l100_m2_e1homalt
99.8494
99.7635
99.9354
60.9109
928022928063
50.0000
raldana-dualsentieonSNPtvmap_l100_m2_e0homalt
99.8479
99.7612
99.9348
60.9327
919222919263
50.0000
raldana-dualsentieonSNPtvmap_l100_m1_e0homalt
99.8450
99.7567
99.9335
58.3702
902122902163
50.0000
raldana-dualsentieonSNPtvmap_l100_m0_e0homalt
99.7265
99.5580
99.8956
59.9142
382917382942
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
99.9237
99.8474
100.0000
34.6480
13092130900
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
85.7143
100.0000
75.0000
91.1111
60621
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.9819
99.9637
100.0000
35.9582
27571275700
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9614
99.9743
99.9486
59.3220
38861388622
100.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_diTR_51to200homalt
94.1176
88.8889
100.0000
95.3216
81800
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
99.7732
99.6038
99.9432
60.7007
17607176011
100.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.7785
99.6681
99.8891
70.9180
540518540565
83.3333
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.7326
99.5995
99.8661
79.1457
14926149221
50.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.4652
99.1471
99.7854
85.1071
465446511
100.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.3062
98.8166
99.8008
85.8631
501650111
100.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
96.2963
95.1220
97.5000
91.1700
3923910
0.0000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
67.6126
525052500
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.1205
786078600
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
44.9657
481048100
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.7785
99.6681
99.8891
70.9180
540518540565
83.3333
raldana-dualsentieonSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9306
99.8911
99.9703
61.3700
10086111008633
100.0000
raldana-dualsentieonSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.6183
99.6183
99.6183
63.0465
522252221
50.0000
raldana-dualsentieonSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
24.3003
17040170400
raldana-dualsentieonSNPtvdecoyhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvHG002compoundhethomalt
99.8228
99.7344
99.9113
42.6999
33799338032
66.6667
raldana-dualsentieonSNPtvHG002complexvarhomalt
99.9758
99.9632
99.9884
22.8157
950763595070119
81.8182
raldana-dualsentieonSNPtv*homalt
99.9865
99.9801
99.9928
19.7814
377048753770422721
77.7778
raldana-dualsentieonSNPtitech_badpromotershomalt
98.7952
100.0000
97.6190
40.8451
4104111
100.0000
raldana-dualsentieonSNPtisegdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtisegduphomalt
99.9134
99.8668
99.9600
87.2078
749510749533
100.0000
raldana-dualsentieonSNPtimap_sirenhomalt
99.8878
99.8127
99.9630
48.3820
3784571378391414
100.0000
raldana-dualsentieonSNPtimap_l250_m2_e1homalt
99.4901
99.0971
99.8862
85.3999
175616175621
50.0000
raldana-dualsentieonSNPtimap_l250_m2_e0homalt
99.4834
99.0852
99.8847
85.3537
173316173321
50.0000
raldana-dualsentieonSNPtimap_l250_m1_e0homalt
99.4375
99.0044
99.8745
84.1493
159116159121
50.0000
raldana-dualsentieonSNPtimap_l250_m0_e0homalt
98.9619
98.3945
99.5360
89.7625
429742921
50.0000
raldana-dualsentieonSNPtimap_l150_m2_e1homalt
99.6939
99.4800
99.9086
69.7472
765340765376
85.7143
raldana-dualsentieonSNPtimap_l150_m2_e0homalt
99.6974
99.4879
99.9077
69.7016
757739757776
85.7143
raldana-dualsentieonSNPtimap_l150_m1_e0homalt
99.6923
99.4814
99.9041
67.2252
728938728976
85.7143
raldana-dualsentieonSNPtimap_l150_m0_e0homalt
99.4913
99.1670
99.8177
71.1111
273823273854
80.0000
raldana-dualsentieonSNPtimap_l125_m2_e1homalt
99.7684
99.6160
99.9212
64.9891
11414441141498
88.8889
raldana-dualsentieonSNPtimap_l125_m2_e0homalt
99.7663
99.6126
99.9205
64.9616
11314441131498
88.8889
raldana-dualsentieonSNPtimap_l125_m1_e0homalt
99.7597
99.6016
99.9183
62.2389
11001441100198
88.8889