PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
85951-86000 / 86044 show all
raldana-dualsentieonINDELC6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-gatkINDELC16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l125_m1_e0hetalt
0.0000
100.0000
00000
ckim-gatkSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
ckim-isaacINDELC1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkINDELC1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
dgrover-gatkSNPtvdecoyhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC16_PLUSmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELC1_5map_sirenhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
01000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
66.6667
86.9565
00210
0.0000
eyeh-varpipeINDELC1_5map_l150_m1_e0hetalt
0.0000
0.0000
100.0000
99.1071
00100
eyeh-varpipeINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-bwafbINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC1_5map_l125_m1_e0hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELC1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUSmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
011000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardINDELD6_15map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtimap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-snapfbINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000