PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtype SubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
301-350 / 86044 show all
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_11to50*
97.2834
97.2128
97.3541
36.0909
71502057175195109
55.8974
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_11to50het
96.8834
96.9671
96.7998
38.7932
4476140450714976
51.0067
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
97.9828
97.6625
98.3051
30.8535
26746426684633
71.7391
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200*
62.2222
66.6667
58.3333
94.7368
63753
60.0000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200het
65.2174
71.4286
60.0000
94.8454
52642
50.0000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
50.0000
50.0000
50.0000
94.1176
11111
100.0000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*map_l100_m0_e0*
81.2078
85.4511
77.3660
74.7301
2806347782774581172172
26.7587
anovak-vgSNP*map_l100_m0_e0het
78.3081
89.0262
69.8934
77.2580
1887823271869380522114
26.2543
anovak-vgSNP*map_l100_m0_e0hetalt
0.0000
37.5000
0.0000
0.0000
610000
anovak-vgSNP*map_l100_m0_e0homalt
87.9850
78.9931
99.2870
62.5031
9179244190526558
89.2308
anovak-vgSNP*map_l100_m1_e0*
84.0947
88.8016
79.8617
69.2688
64295810863514160163537
22.0842
anovak-vgSNP*map_l100_m1_e0het
80.4155
91.0315
72.0169
72.1565
41291406840830158653407
21.4749
anovak-vgSNP*map_l100_m1_e0hetalt
0.0000
29.2683
0.0000
0.0000
1229000
anovak-vgSNP*map_l100_m1_e0homalt
91.6965
85.1461
99.3387
58.6113
22992401122684151130
86.0927
anovak-vgSNP*map_l100_m2_e0*
84.2603
88.9000
80.0809
71.0026
65754821064960161583566
22.0696
anovak-vgSNP*map_l100_m2_e0het
80.6158
91.0795
72.3085
73.6388
42260413941790160043433
21.4509
anovak-vgSNP*map_l100_m2_e0hetalt
0.0000
30.9524
0.0000
0.0000
1329000
anovak-vgSNP*map_l100_m2_e0homalt
91.7943
85.3141
99.3397
61.4498
23481404223170154133
86.3636
anovak-vgSNP*map_l100_m2_e1*
84.3316
88.9439
80.1741
71.0026
66474826365661162373582
22.0607
anovak-vgSNP*map_l100_m2_e1het
80.7046
91.1126
72.4307
73.6475
42730416842251160823449
21.4463
anovak-vgSNP*map_l100_m2_e1hetalt
0.0000
30.2326
0.0000
0.0000
1330000
anovak-vgSNP*map_l100_m2_e1homalt
91.8309
85.3756
99.3422
61.4163
23731406523410155133
85.8065
anovak-vgSNP*map_l125_m0_e0*
79.0837
83.3789
75.2094
80.8664
1616332221598252681460
27.7145
anovak-vgSNP*map_l125_m0_e0het
76.4858
87.7448
67.7876
82.7028
1111215521100652301427
27.2849
anovak-vgSNP*map_l125_m0_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgSNP*map_l125_m0_e0homalt
85.5602
75.1937
99.2421
70.8421
5047166549763833
86.8421
anovak-vgSNP*map_l125_m1_e0*
81.0489
87.0673
75.8087
74.5245
39465586239018124512766
22.2151
anovak-vgSNP*map_l125_m1_e0het
77.1793
90.4691
67.2939
76.7918
25686270625425123572688
21.7529
anovak-vgSNP*map_l125_m1_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l125_m1_e0homalt
89.5021
81.4552
99.3132
65.1171
137703135135939478
82.9787
anovak-vgSNP*map_l125_m2_e0*
81.2942
87.1691
76.1613
76.0893
40728599540268126042812
22.3104
anovak-vgSNP*map_l125_m2_e0het
77.4707
90.4768
67.7339
78.1138
26526279226255125072731
21.8358
anovak-vgSNP*map_l125_m2_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l125_m2_e0homalt
89.6412
81.6863
99.3125
67.9435
141933182140139781
83.5052
anovak-vgSNP*map_l125_m2_e1*
81.3800
87.2421
76.2560
76.1127
41180602240707126752820
22.2485
anovak-vgSNP*map_l125_m2_e1het
77.5666
90.5162
67.8585
78.1432
26829281126551125762737
21.7637
anovak-vgSNP*map_l125_m2_e1hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l125_m2_e1homalt
89.7095
81.8047
99.3055
67.9368
143423190141569983
83.8384
anovak-vgSNP*map_l150_m0_e0*
77.8146
81.9066
74.1121
85.6738
9855217797453404959
28.1727
anovak-vgSNP*map_l150_m0_e0het
75.3571
86.4106
66.8109
87.0439
6861107967963376934
27.6659
anovak-vgSNP*map_l150_m0_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNP*map_l150_m0_e0homalt
84.1702
73.1719
99.0595
77.5693
2992109729492825
89.2857
anovak-vgSNP*map_l150_m1_e0*
79.3251
85.8375
73.7311
78.7422
2627443352597492542118
22.8874
anovak-vgSNP*map_l150_m1_e0het
75.5953
89.9876
65.1719
80.5681
1738219341719391882064
22.4641