PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
51-100 / 86044 show all
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.2280
1501500
rpoplin-dv42SNP*func_cdshetalt
100.0000
100.0000
100.0000
60.0000
1001000
rpoplin-dv42INDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
30300
rpoplin-dv42INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
40.0000
30300
rpoplin-dv42INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
rpoplin-dv42INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
rpoplin-dv42INDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
93.7500
30300
rpoplin-dv42INDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.3333
30300
rpoplin-dv42INDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.1053
30300
rpoplin-dv42INDELI6_15map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
88.5714
40400
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
57.2464
5905900
rpoplin-dv42INDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
rpoplin-dv42INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
60.6061
1301300
rpoplin-dv42INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
rpoplin-dv42INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
55.5556
80800
rpoplin-dv42INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
59.2593
2202200
rpoplin-dv42INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.1787
90900
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9820
10100
rpoplin-dv42INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9928
10100
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2143
10100
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9149
10100
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3607
10100
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9174
10100
rpoplin-dv42INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
31.6092
119011900
rpoplin-dv42INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
rpoplin-dv42INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
20200
rpoplin-dv42INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
66.6667
20200
rpoplin-dv42INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
66.6667
40400
rpoplin-dv42INDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
95.7895
40400
rpoplin-dv42INDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
87.5000
10100
rpoplin-dv42INDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
80.0000
10100
rpoplin-dv42INDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
80.0000
10100
rpoplin-dv42INDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
61.7647
1301300
rpoplin-dv42INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.3846
1601600
rpoplin-dv42INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
52.3810
2002000
rpoplin-dv42INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
80.0000
20200
rpoplin-dv42INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
rpoplin-dv42INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.4072
60600
rpoplin-dv42INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9231
20200
rpoplin-dv42INDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
96.3731
1401400
rpoplin-dv42INDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
96.4401
2202200
rpoplin-dv42INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.3636
60600
rpoplin-dv42INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.8254
20200
rpoplin-dv42INDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
96.2766
1401400
rpoplin-dv42INDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
96.3576
2202200
rpoplin-dv42INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.6216
50500
rpoplin-dv42INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.3636
20200
rpoplin-dv42INDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
96.6867
1101100
rpoplin-dv42INDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
96.6355
1801800