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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 37 38 39 40 41 42 43 44 45 ... 1720 1721 » 2001-2050 / 86044 show all
ndellapenna-hhga	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.2625	98.9379	99.5892	62.6573	1211	13	1212	5	5	100.0000
ndellapenna-hhga	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.8377	5273	2	5273	0	0
ndellapenna-hhga	SNP	ti	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	ti	HG002compoundhet	homalt	98.8916	99.5266	98.2646	31.2248	7359	35	7361	130	119	91.5385
ndellapenna-hhga	SNP	ti	HG002complexvar	homalt	99.8705	99.8403	99.9007	18.4130	193154	309	193175	192	171	89.0625
ndellapenna-hhga	SNP	ti	*	homalt	99.9286	99.8893	99.9678	16.7330	802149	889	802170	258	209	81.0078
ndellapenna-hhga	SNP	*	tech_badpromoters	homalt	99.3789	100.0000	98.7654	50.6098	80	0	80	1	1	100.0000
ndellapenna-hhga	SNP	*	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	segdup	homalt	99.7258	99.8883	99.5639	88.9154	10731	12	10731	47	47	100.0000
ndellapenna-hhga	SNP	*	map_siren	homalt	99.8258	99.7135	99.9382	52.6378	54998	158	54999	34	30	88.2353
ndellapenna-hhga	SNP	*	map_l250_m2_e1	homalt	99.3346	98.8595	99.8143	86.9517	2687	31	2687	5	5	100.0000
ndellapenna-hhga	SNP	*	map_l250_m2_e0	homalt	99.3266	98.8459	99.8120	86.8985	2655	31	2655	5	5	100.0000
ndellapenna-hhga	SNP	*	map_l250_m1_e0	homalt	99.2653	98.7414	99.7948	85.6165	2432	31	2432	5	5	100.0000
ndellapenna-hhga	SNP	*	map_l250_m0_e0	homalt	98.9608	98.4102	99.5177	90.5327	619	10	619	3	3	100.0000
ndellapenna-hhga	SNP	*	map_l150_m2_e1	homalt	99.6950	99.4842	99.9066	72.4121	11766	61	11766	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m2_e0	homalt	99.6916	99.4786	99.9056	72.3853	11638	61	11638	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m1_e0	homalt	99.6799	99.4589	99.9020	69.8014	11212	61	11212	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m0_e0	homalt	99.5215	99.1930	99.8523	72.7346	4056	33	4056	6	5	83.3333
ndellapenna-hhga	SNP	*	map_l125_m2_e1	homalt	99.7429	99.5665	99.9199	68.0072	17456	76	17456	14	13	92.8571
ndellapenna-hhga	SNP	*	map_l125_m2_e0	homalt	99.7405	99.5626	99.9191	67.9668	17299	76	17299	14	13	92.8571
ndellapenna-hhga	SNP	*	map_l125_m1_e0	homalt	99.7333	99.5504	99.9169	65.2026	16829	76	16829	14	13	92.8571
ndellapenna-hhga	SNP	*	map_l125_m0_e0	homalt	99.5815	99.2700	99.8951	66.7961	6663	49	6663	7	6	85.7143
ndellapenna-hhga	SNP	*	map_l100_m2_e1	homalt	99.7857	99.6546	99.9170	62.4746	27700	96	27700	23	21	91.3043
ndellapenna-hhga	SNP	*	map_l100_m2_e0	homalt	99.7835	99.6512	99.9162	62.4810	27427	96	27427	23	21	91.3043
ndellapenna-hhga	SNP	*	map_l100_m1_e0	homalt	99.7849	99.6482	99.9220	59.8338	26908	95	26908	21	19	90.4762
ndellapenna-hhga	SNP	*	map_l100_m0_e0	homalt	99.6765	99.4406	99.9135	60.1441	11555	65	11555	10	8	80.0000
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	66.6667	50.0000	100.0000	97.0588	1	1	1	0	0
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.8356	99.8174	99.8539	32.2109	2733	5	2734	4	3	75.0000
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	86.1111	75.6098	100.0000	91.5254	31	10	30	0	0
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4656	99.3180	99.6136	37.1650	6699	46	6703	26	25	96.1538
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7617	99.7043	99.8191	54.9748	6070	18	6071	11	9	81.8182
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	85.7143	80.0000	92.3077	92.6966	12	3	12	1	1	100.0000
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.8830	98.6107	99.1567	58.6659	3407	48	3410	29	25	86.2069
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.3248	99.2165	99.4333	71.0574	16842	133	16845	96	85	88.5417
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.7108	98.7484	98.6731	78.8824	3866	49	3867	52	45	86.5385
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	96.2011	96.5962	95.8091	80.4640	823	29	823	36	31	86.1111
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	95.7480	95.8991	95.5975	81.7695	912	39	912	42	37	88.0952
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	91.7765	90.9091	92.6606	88.7745	100	10	101	8	8	100.0000
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.6385	99.6385	99.6385	58.9249	1378	5	1378	5	4	80.0000
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.6448	99.6448	99.6448	54.2090	2244	8	2244	8	6	75.0000
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.7512	99.6892	99.8133	54.3984	1604	5	1604	3	2	66.6667
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.3248	99.2165	99.4333	71.0574	16842	133	16845	96	85	88.5417
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4700	99.4059	99.5342	55.3861	20079	120	20088	94	83	88.2979
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.0531	98.7414	99.3667	63.5237	1726	22	1726	11	10	90.9091

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