PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecall PrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
86001-86044 / 86044 show all
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
97.5904
30332
66.6667
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.2684
20221
50.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
89.4737
10111
100.0000
ghariani-varprowlINDELD6_15map_l150_m0_e0het
86.9565
100.0000
76.9231
95.7096
2002066
100.0000
ghariani-varprowlINDELD6_15map_l150_m1_e0het
86.6667
100.0000
76.4706
94.7639
390391211
91.6667
ghariani-varprowlINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.4887
60600
ghariani-varprowlINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
98.8439
40400
ghariani-varprowlINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.0784
20200
ghariani-varprowlINDELD6_15map_l250_m1_e0het
91.6667
100.0000
84.6154
97.7966
1101121
50.0000
ghariani-varprowlINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
93.8272
50500
ghariani-varprowlINDELD6_15map_l250_m2_e0het
93.3333
100.0000
87.5000
97.6190
1401421
50.0000
ghariani-varprowlINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
93.4066
60600
ghariani-varprowlINDELD6_15map_l250_m2_e1het
93.3333
100.0000
87.5000
97.6710
1401421
50.0000
ghariani-varprowlINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
93.5484
60600
ghariani-varprowlINDELI16_PLUSHG002compoundhethomalt
7.5000
100.0000
3.8961
67.2340
3037473
98.6486
ghariani-varprowlINDELI16_PLUSmap_l100_m0_e0het
84.2105
100.0000
72.7273
81.0345
80832
66.6667
ghariani-varprowlINDELI16_PLUSmap_l125_m0_e0het
66.6667
100.0000
50.0000
84.6154
30332
66.6667
ghariani-varprowlINDELI16_PLUSmap_l150_m0_e0het
57.1429
100.0000
40.0000
84.8485
20232
66.6667
ghariani-varprowlINDELI16_PLUSmap_l250_m1_e0*
66.6667
100.0000
50.0000
95.2381
10110
0.0000
ghariani-varprowlINDELI16_PLUSmap_l250_m1_e0het
66.6667
100.0000
50.0000
94.7368
10110
0.0000
ghariani-varprowlINDELI16_PLUSmap_l250_m2_e0*
66.6667
100.0000
50.0000
95.6522
10110
0.0000
ghariani-varprowlINDELI16_PLUSmap_l250_m2_e0het
66.6667
100.0000
50.0000
95.0000
10110
0.0000
ghariani-varprowlINDELI16_PLUSmap_l250_m2_e1*
66.6667
100.0000
50.0000
95.9184
10110
0.0000
ghariani-varprowlINDELI16_PLUSmap_l250_m2_e1het
66.6667
100.0000
50.0000
95.3488
10110
0.0000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
12.5000
100.0000
6.6667
88.9706
1011411
78.5714
ghariani-varprowlINDELI1_5map_l250_m0_e0het
88.2353
100.0000
78.9474
98.8527
1501541
25.0000
ghariani-varprowlINDELI1_5tech_badpromotershet
84.2105
100.0000
72.7273
57.6923
80833
100.0000
ghariani-varprowlINDELI6_15func_cdshet
87.2727
100.0000
77.4194
39.2157
2402477
100.0000
ghariani-varprowlINDELI6_15map_l250_m0_e0*
66.6667
100.0000
50.0000
98.5185
10110
0.0000
ghariani-varprowlINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.7368
10100
ghariani-varprowlINDELI6_15tech_badpromotershet
77.7778
100.0000
63.6364
54.1667
70744
100.0000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
98.8634
100.0000
97.7524
37.9730
2738027406341
65.0794
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_51to200*
85.7143
100.0000
75.0000
97.3684
90930
0.0000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_51to200het
93.3333
100.0000
87.5000
97.8723
70710
0.0000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
100.0000
50.0000
95.0000
20220
0.0000
ghariani-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
98.9631
100.0000
97.9475
55.8853
85808591812
66.6667
ghariani-varprowlSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.7391
60600
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.4433
100.0000
98.8927
33.8067
142701429169
56.2500
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200*
94.1176
100.0000
88.8889
97.3684
80810
0.0000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.8873
60600
ghariani-varprowlSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
80.0000
100.0000
66.6667
94.8276
20210
0.0000
ghariani-varprowlSNPtitech_badpromotershomalt
98.7952
100.0000
97.6190
44.7368
4104111
100.0000
ghariani-varprowlSNPtvfunc_cdshomalt
99.7950
100.0000
99.5909
28.7083
17040170475
71.4286
ghariani-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.7680
100.0000
97.5659
60.0486
4810481128
66.6667