PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1-50 / 86044 show all
anovak-vgINDEL***
70.4960
69.7491
71.2591
54.1876
24031510422724860610027081436
81.2167
anovak-vgINDEL**het
69.4961
61.0200
80.7068
58.0873
118460756731311723135716629
53.0312
anovak-vgINDEL**hetalt
0.0000
25.9341
0.0000
0.0000
654518692000
anovak-vgINDEL**homalt
74.8405
92.1212
63.0190
50.1342
11531098621174346891364807
94.0418
anovak-vgINDELC16_PLUS**
0.0000
0.0000
20.0000
90.1961
00140
0.0000
anovak-vgINDELC16_PLUS*het
0.0000
0.0000
25.0000
90.2439
00130
0.0000
anovak-vgINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUS*homalt
0.0000
0.0000
90.0000
00010
0.0000
anovak-vgINDELC1_5**
51.8752
80.0000
38.3817
91.6130
8218529725
8.4175
anovak-vgINDELC1_5*het
40.9055
77.7778
27.7500
90.6933
7211128920
6.9204
anovak-vgINDELC1_5*hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELC1_5*homalt
0.0000
0.0000
90.2439
94.3409
007485
62.5000
anovak-vgINDELC6_15**
35.2941
100.0000
21.4286
89.7623
7012445
11.3636
anovak-vgINDELC6_15*het
31.2500
100.0000
18.5185
88.2096
7010445
11.3636
anovak-vgINDELC6_15*hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15*homalt
0.0000
0.0000
100.0000
97.7528
00200
anovak-vgINDELD16_PLUS**
64.9199
56.1321
76.9701
52.6377
3808297637801131815
72.0601
anovak-vgINDELD16_PLUS*het
72.6101
70.2754
75.1054
49.0881
22209392495827601
72.6723
anovak-vgINDELD16_PLUS*hetalt
0.0000
16.4511
0.0000
0.0000
3181615000
anovak-vgINDELD16_PLUS*homalt
77.8556
75.0591
80.8685
58.6629
12704221285304214
70.3947
anovak-vgINDELD1_5**
90.2130
89.2296
91.2183
56.6455
13094015805132532127599010
70.6168
anovak-vgINDELD1_5*het
92.1131
94.4127
89.9228
55.4448
8268148938677197246623
68.1098
anovak-vgINDELD1_5*hetalt
0.0000
29.0971
0.0000
0.0000
29817264000
anovak-vgINDELD1_5*homalt
93.1579
92.5438
93.7802
58.8390
4527836484576130352387
78.6491
anovak-vgINDELD6_15**
67.2100
61.4480
74.1646
48.0426
16033100591620256444329
76.7009
anovak-vgINDELD6_15*het
76.4820
81.7202
71.8750
45.3746
947321191152345093518
78.0217
anovak-vgINDELD6_15*hetalt
0.0000
24.6269
0.0000
0.0000
20136161000
anovak-vgINDELD6_15*homalt
75.9353
71.8780
80.4782
54.2097
4547177946791135811
71.4537
anovak-vgINDELI16_PLUS**
32.9342
25.0588
48.0286
39.2493
15984779154716741112
66.4277
anovak-vgINDELI16_PLUS*het
20.3076
12.3988
56.0773
46.0104
337238140631857
17.9245
anovak-vgINDELI16_PLUS*hetalt
0.0000
7.1020
0.0000
0.0000
1491949000
anovak-vgINDELI16_PLUS*homalt
55.6761
71.2364
45.6948
36.9604
1112449114113561055
77.8024
anovak-vgINDELI1_5**
54.8287
54.8578
54.7996
53.4671
8265168013848446998259671
85.2662
anovak-vgINDELI1_5*het
38.2803
26.6836
67.7044
67.2836
210915795025553121894021
32.9888
anovak-vgINDELI1_5*hetalt
0.0000
31.2282
0.0000
0.0000
34967699000
anovak-vgINDELI1_5*homalt
66.3251
96.0879
50.6397
46.1343
580642364592915779355650
96.2919
anovak-vgINDELI6_15**
44.4248
38.7222
52.0973
38.6048
961215211951487486474
74.0055
anovak-vgINDELI6_15*het
35.7228
26.3530
55.4313
44.2246
26447389431234671789
51.6008
anovak-vgINDELI6_15*hetalt
0.0000
22.5588
0.0000
0.0000
19296622000
anovak-vgINDELI6_15*homalt
61.4755
80.7661
49.6232
33.6435
50391200520252814685
88.7143
anovak-vgSNP***
98.4545
98.3357
98.5736
21.3437
30037965083829873484322718700
43.2600
anovak-vgSNP**het
98.0636
98.0936
98.0337
24.0083
18378833571818289093668413178
35.9230
anovak-vgSNP**hetalt
0.0000
14.4661
0.0000
0.0000
126745000
anovak-vgSNP**homalt
99.1091
98.7819
99.4384
16.6644
116578714375115843965435522
84.3955
anovak-vgSNPti**
98.4812
98.2960
98.6672
19.8346
20499803553820437292760712786
46.3143
anovak-vgSNPti*het
98.0963
98.0413
98.1515
22.3908
1256788251091253632236109204
38.9835
anovak-vgSNPti*hetalt
0.0000
15.8076
0.0000
0.0000
92490000
anovak-vgSNPti*homalt
99.1281
98.7623
99.4967
15.3503
793100993979009739973582
89.6172
anovak-vgSNPtv**
98.3366
98.3717
98.3016
24.5602
95390815790951566164416526
39.6934
anovak-vgSNPtv*het
97.9352
98.2070
97.6649
27.4537
58109510609580225138734566
32.9129