PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1-34 / 34
gduggal-snapplatINDEL***
76.4210
69.0418
85.5664
67.7420
237878106664258555436146600
15.1328
ltrigg-rtg2INDEL***
99.2539
98.8759
99.6347
56.1284
34066838733404111248516
41.3462
ltrigg-rtg1INDEL***
99.0160
98.3355
99.7061
56.0561
3388065735338554998454
45.4910
gduggal-snapfbINDEL***
92.2602
90.5733
94.0112
57.2799
31206332479322983205759778
47.5237
qzeng-customINDEL***
96.8316
96.8703
96.7929
56.5999
33375910783347076115005547
48.2348
jlack-gatkINDEL***
98.6899
98.8138
98.5664
60.1151
340455408734033249502708
54.7071
jmaeng-gatkINDEL***
99.1098
99.0216
99.1981
60.9184
341171337134103827571621
58.7958
asubramanian-gatkINDEL***
98.8418
98.5404
99.1451
71.3671
339513502933944229271779
60.7790
gduggal-bwaplatINDEL***
92.6621
87.0843
99.0034
65.2816
3000424450029991730191851
61.3117
ckim-gatkINDEL***
99.2271
99.1551
99.2992
60.7185
341631291134149224101553
64.4398
ckim-dragenINDEL***
99.1359
99.1574
99.1143
60.3466
341639290334130330502010
65.9016
ciseli-customINDEL***
83.5453
82.5314
84.5844
60.0787
284352601862847185189036584
70.5030
ckim-isaacINDEL***
95.8099
93.7006
98.0163
48.2658
3228382170432185765144603
70.6632
hfeng-pmm1INDEL***
99.3397
99.0289
99.6526
57.3618
34119633463410571189887
74.6005
gduggal-snapvardINDEL***
83.0264
83.4429
82.6139
57.1178
287491570453277556897651941
75.3030
hfeng-pmm2INDEL***
99.3119
99.0152
99.6103
57.8578
341149339334101513341012
75.8621
cchapple-customINDEL***
99.1388
98.8448
99.4346
57.2260
340562398036352020671592
77.0198
ckim-vqsrINDEL***
99.2541
99.0614
99.4476
60.7768
341308323434116718951532
80.8443
dgrover-gatkINDEL***
99.4009
99.3458
99.4561
60.2776
342288225434215418711513
80.8658
hfeng-pmm3INDEL***
99.3628
99.0161
99.7120
56.9384
3411523390341013985798
81.0152
astatham-gatkINDEL***
99.3424
99.2404
99.4446
59.9126
341925261734178819091550
81.1943
jli-customINDEL***
99.3675
99.0788
99.6580
57.6935
34136831743412131171951
81.2126
anovak-vgINDEL***
70.4960
69.7491
71.2591
54.1876
24031510422724860610027081436
81.2167
bgallagher-sentieonINDEL***
99.2678
99.2143
99.3213
59.6036
341835270734170323351924
82.3983
ndellapenna-hhgaINDEL***
97.3838
97.0938
97.6756
75.8762
3345291001333524979786638
83.2038
egarrison-hhgaINDEL***
97.4253
97.1646
97.6874
75.7607
334773976933527679376682
84.1880
gduggal-bwafbINDEL***
96.9474
95.5004
98.4390
56.3888
3290391550334249254314691
86.3745
raldana-dualsentieonINDEL***
99.1095
98.7566
99.4648
57.7282
340258428434012018301626
88.8525
ghariani-varprowlINDEL***
87.2025
87.3272
87.0781
72.0067
300877436633006324461240345
90.4353
gduggal-bwavardINDEL***
87.3464
87.1769
87.5166
58.1126
300361441812993414269838856
91.0019
rpoplin-dv42INDEL***
98.9802
98.7882
99.1728
78.6199
340367417534037028392640
92.9905
eyeh-varpipeINDEL***
92.5779
91.3854
93.8021
63.3717
314861296813171112095320114
95.9958
mlin-fermikitINDEL***
95.5997
94.8918
96.3183
54.9677
326942176003265721248312097
96.9078
jpowers-varprowlINDEL***
86.4885
85.2886
87.7226
56.7888
293855506872936274109540121
97.6299