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Explore HG002 comparison results
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EntryTypeSubtype SubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83651-83700 / 86044 show all
rpoplin-dv42SNPtvdecoyhomalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvfunc_cds*
99.9199
99.9314
99.9085
29.6249
43683436741
25.0000
rpoplin-dv42SNPtvfunc_cdshet
99.8871
99.9247
99.8495
30.5098
26552265441
25.0000
rpoplin-dv42SNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
60.0000
1001000
rpoplin-dv42SNPtvfunc_cdshomalt
99.9706
99.9413
100.0000
27.8695
17031170300
rpoplin-dv42SNPtvlowcmp_AllRepeats_51to200bp_gt95identity_merged*
99.4386
99.3404
99.5370
69.4360
150610150572
28.5714
rpoplin-dv42SNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
99.3435
99.1935
99.4939
70.5690
984898351
20.0000
rpoplin-dv42SNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.6183
99.6183
99.6183
66.9401
522252221
50.0000
rpoplin-dv42SNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.8590
99.8446
99.8734
64.1005
2763543276223519
54.2857
rpoplin-dv42SNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.8491
99.8406
99.8576
65.2848
1754028175272517
68.0000
rpoplin-dv42SNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
81.2500
1211200
rpoplin-dv42SNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.8811
99.8613
99.9009
61.7921
100831410083102
20.0000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331*
99.5504
99.5402
99.5606
75.8969
1450467145026417
26.5625
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331het
99.4197
99.4416
99.3979
75.9193
90825190805515
27.2727
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.2280
1501500
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.7694
99.7050
99.8338
75.7174
540716540792
22.2222
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.7381
99.7754
99.7008
54.7087
13333133341
25.0000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.6495
99.7661
99.5333
55.1309
853285341
25.0000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.8959
99.7921
100.0000
53.7572
480148000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.8619
99.8160
99.9079
64.2822
21704217021
50.0000
raldana-dualsentieonSNPtvsegduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNPtvsegduphomalt
99.8765
99.9382
99.8149
89.2756
32362323666
100.0000
raldana-dualsentieonSNPtvsegdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvtech_badpromoters*
97.9021
97.2222
98.5915
49.6454
7027011
100.0000
raldana-dualsentieonSNPtvtech_badpromotershet
98.4615
96.9697
100.0000
48.3871
3213200
raldana-dualsentieonSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvtech_badpromotershomalt
97.4359
97.4359
97.4359
50.6329
3813811
100.0000
raldana-dualsentieonSNPtv**
99.9049
99.8971
99.9127
21.2799
96869299896861284644
5.2010
raldana-dualsentieonSNPtv*het
99.8532
99.8447
99.8617
22.1748
59077791959070381822
2.6895
raldana-dualsentieonSNPtv*hetalt
99.7125
99.5408
99.8848
38.3960
867486711
100.0000
raldana-dualsentieonSNPtv*homalt
99.9865
99.9801
99.9928
19.7814
377048753770422721
77.7778
raldana-dualsentieonSNPtvHG002complexvar*
99.8458
99.7136
99.9784
21.7224
2454477052453625318
33.9623
raldana-dualsentieonSNPtvHG002complexvarhet
99.7643
99.5575
99.9720
20.9789
150064667149985429
21.4286
raldana-dualsentieonSNPtvHG002complexvarhetalt
99.5138
99.0323
100.0000
35.3684
307330700
raldana-dualsentieonSNPtvHG002complexvarhomalt
99.9758
99.9632
99.9884
22.8157
950763595070119
81.8182
raldana-dualsentieonSNPtvHG002compoundhet*
96.9959
94.2620
99.8931
47.1699
8411512841095
55.5556
raldana-dualsentieonSNPtvHG002compoundhethet
94.2957
89.3216
99.8564
53.2191
4174499417263
50.0000