PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
401-450 / 86044 show all
raldana-dualsentieonINDELD16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.0000
10100
raldana-dualsentieonINDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.0000
10100
raldana-dualsentieonINDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
90.0000
30300
raldana-dualsentieonINDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
89.2857
30300
raldana-dualsentieonINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.0588
20200
raldana-dualsentieonINDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
94.7368
10100
raldana-dualsentieonINDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
87.5000
40500
raldana-dualsentieonINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
63.4146
4504500
raldana-dualsentieonINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.4533
1501500
raldana-dualsentieonINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
91.8182
90900
raldana-dualsentieonINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
83.3333
2302300
raldana-dualsentieonINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
54.2857
1201600
raldana-dualsentieonINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.9849
211021100
raldana-dualsentieonINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
46.1538
1201400
raldana-dualsentieonINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
71.6049
1902300
raldana-dualsentieonINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
10100
raldana-dualsentieonINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.7283
10100
raldana-dualsentieonINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
10100
raldana-dualsentieonINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.7361
10100
raldana-dualsentieonINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
40400
raldana-dualsentieonINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.6486
20200
raldana-dualsentieonINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
98.9873
40400
raldana-dualsentieonINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
98.9565
60600
raldana-dualsentieonINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
raldana-dualsentieonINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
raldana-dualsentieonINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9951
10100
raldana-dualsentieonINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9969
10100
raldana-dualsentieonINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.8421
60600
raldana-dualsentieonINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.7391
60600
raldana-dualsentieonINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.0784
60600
raldana-dualsentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.8747
1601600
raldana-dualsentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
95.2381
10100
raldana-dualsentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.7143
30300
raldana-dualsentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.2816
1001000
raldana-dualsentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.2500
30300
raldana-dualsentieonINDEL*func_cdshomalt
100.0000
100.0000
100.0000
36.3380
226022600
raldana-dualsentieonINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9232
30300
raldana-dualsentieonINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8020
10100
raldana-dualsentieonINDEL*decoyhet
100.0000
100.0000
100.0000
99.9259
60600
raldana-dualsentieonINDEL*decoy*
100.0000
100.0000
100.0000
99.9200
1001000
qzeng-customSNPtvsegduphetalt
100.0000
100.0000
100.0000
97.9228
70700
qzeng-customSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
98.8095
10100
qzeng-customSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
99.0099
10100
qzeng-customSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
qzeng-customSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
96.2963
10100
qzeng-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
97.0120
1501500
qzeng-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.2500
30300
qzeng-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.7143
20200
qzeng-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
20200
qzeng-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
71.9914
525051900