PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotype F-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1-50 / 86044 show all
anovak-vgINDEL***
70.4960
69.7491
71.2591
54.1876
24031510422724860610027081436
81.2167
anovak-vgINDEL*HG002complexvar*
72.8155
71.0364
74.6860
53.4026
5465422284560691900416560
87.1395
anovak-vgINDEL*HG002compoundhet*
36.9041
30.6776
46.3018
57.6241
919120769158131833913521
73.7281
anovak-vgINDEL*decoy*
67.7419
60.0000
77.7778
99.9553
64720
0.0000
anovak-vgINDEL*func_cds*
81.4334
80.2247
82.6790
38.5816
357883587554
72.0000
anovak-vgINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
39.8320
33.8727
48.3358
55.3849
34126661419744863438
76.6384
anovak-vgINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
56.0510
55.0000
57.1429
99.4951
119865
83.3333
anovak-vgINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
72.8701
70.9790
74.8646
68.2103
6703927410796292673520426
76.4017
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
58.0405
54.1246
62.5672
55.8642
3537129980435582606019700
75.5948
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
63.6599
61.2245
66.2970
66.6238
13208361375699438
62.6609
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
53.3898
52.9412
53.8462
99.5165
98765
83.3333
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
73.8753
73.0416
74.7283
69.3443
3739138038501302863
66.2826
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
77.9189
77.3944
78.4506
71.4753
28048192876790545
68.9873
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
33.6989
27.4371
43.6639
50.1227
16694414221928632250
78.5889
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
80.0000
66.6667
100.0000
98.8095
21100
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
51.7221
46.8234
57.7656
39.6200
1774720155247261807814175
78.4102
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
54.6126
50.3907
59.6067
38.4218
1612115871225511528211968
78.3144
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
54.3121
49.8996
59.5807
47.5940
2162421711287001947015099
77.5501
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
58.0405
54.1246
62.5672
55.8642
3537129980435582606019700
75.5948
anovak-vgINDEL*lowcmp_SimpleRepeat_diTR_11to50*
63.5093
59.8218
67.6813
39.7409
2189014702302171442911301
78.3214
anovak-vgINDEL*lowcmp_SimpleRepeat_diTR_51to200*
23.1772
16.4208
39.3809
42.5111
3451756458705585
82.9787
anovak-vgINDEL*lowcmp_SimpleRepeat_homopolymer_6to10*
91.9743
92.1019
91.8470
57.2556
2602822322742024341757
72.1857
anovak-vgINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
51.7766
41.1290
69.8630
99.9464
5173512218
81.8182
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
68.5075
66.4183
70.7325
47.6018
1319266701543163854862
76.1472
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_51to200*
30.1806
24.9718
38.1353
46.7618
663199295315461250
80.8538
anovak-vgINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_11to50*
72.6300
71.4689
73.8294
38.5577
48121921591320961645
78.4828
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_51to200*
26.7404
22.0721
33.9130
42.0655
4917378152131
86.1842
anovak-vgINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgINDEL*map_l100_m0_e0*
72.6539
73.0006
72.3105
87.1262
11414221183453264
58.2781
anovak-vgINDEL*map_l100_m1_e0*
72.2354
72.6157
71.8590
84.0163
260498226711046628
60.0382
anovak-vgINDEL*map_l100_m2_e0*
72.4393
72.7593
72.1222
84.8313
2687100627631068640
59.9251
anovak-vgINDEL*map_l100_m2_e1*
72.2208
72.4441
71.9990
84.9008
2721103527951087655
60.2576
anovak-vgINDEL*map_l125_m0_e0*
71.3287
72.2222
70.4570
90.6359
637245663278156
56.1151
anovak-vgINDEL*map_l125_m1_e0*
72.5033
74.1813
70.8995
87.0946
15635441608660372
56.3636
anovak-vgINDEL*map_l125_m2_e0*
72.8494
74.4991
71.2712
87.8407
16365601682678383
56.4897
anovak-vgINDEL*map_l125_m2_e1*
72.6951
74.3371
71.1241
87.8885
16545711702691393
56.8741
anovak-vgINDEL*map_l150_m0_e0*
70.9648
71.4008
70.5341
93.5272
36714738316088
55.0000
anovak-vgINDEL*map_l150_m1_e0*
72.5622
74.5142
70.7099
89.9578
9973411026425224
52.7059
anovak-vgINDEL*map_l150_m2_e0*
72.9602
74.8580
71.1564
90.5195
10543541083439234
53.3030
anovak-vgINDEL*map_l150_m2_e1*
72.7945
74.6352
71.0425
90.5099
10743651104450242
53.7778
anovak-vgINDEL*map_l250_m0_e0*
64.4116
67.9487
61.2245
98.1965
5325603820
52.6316
anovak-vgINDEL*map_l250_m1_e0*
66.8127
69.1803
64.6018
96.2450
2119421912061
50.8333
anovak-vgINDEL*map_l250_m2_e0*
67.7533
69.7885
65.8333
96.4399
23110023712363
51.2195
anovak-vgINDEL*map_l250_m2_e1*
67.7462
69.9700
65.6593
96.4861
23310023912563
50.4000
anovak-vgINDEL*map_siren*
72.9885
73.1309
72.8467
79.6324
54191991548920461378
67.3509
anovak-vgINDEL*segdup*
73.2929
72.4961
74.1075
94.2874
18537031889660536
81.2121
anovak-vgINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
anovak-vgINDEL*tech_badpromoters*
66.4036
56.5789
80.3571
44.5545
4333451110
90.9091
anovak-vgINDELC16_PLUS**
0.0000
0.0000
20.0000
90.1961
00140
0.0000