Welcome to precisionFDA
A community platform for NGS assay evaluation and regulatory science exploration.
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Write and publish rich notes describing your thoughts and your work
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Attach any files, comparisons, or apps
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Read what others are reporting and reproduce their workflows
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Upload your own files on cloud storage
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Generate files through running apps
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Publish reference data or any other files
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Browse other members' contributions
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Quantify the similarity between two sets of genomic variants (VCF files)
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Compare your own test set (for a given biospecimen) to established benchmark sets
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Run mapping and variation calling pipelines or other Linux-based software apps on the cloud
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Contribute your own software and scripts and let others explore them
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precisionFDA Challenges
App-a-thon in a Box
- 3 responses
- 9 followers
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Challenge started31 Aug 2016 12:00 UTC
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30 days left
Submissions closed28 Oct 2016 12:00 UTC -
Results announcedTBD
Truth Challenge
- 25 responses
- 58 followers
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Challenge started27 Apr 2016 03:59 UTC
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Submissions closed27 May 2016 03:59 UTC
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Results announced29 Jun 2016 13:30 UTC
Consistency Challenge
- 17 responses
- 54 followers
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Challenge started26 Feb 2016 03:59 UTC
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Submissions closed26 Apr 2016 03:59 UTC
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Results announced26 May 2016 00:50 UTC
Latest News and Announcements
Optimizing Regulatory Oversight for Next Generation Sequencing Test
July 6th, 2016
In support of the White House’s Precision Medicine Initiative, the FDA issued two draft guidances that offer a streamlined approach to the oversight of ‘Next Generation Sequencing’ tests that detect medically important differences in a person’s genomic makeup.
Interview with the former FDA Chief Health Informatics Officer about precisionFDA
precisionFDA demonstrates FDA's commitment to innovating the regulatory science needed to advance the growing era of precision medicine
Robert Califf
Community Participants
The comparison framework uses open-source software by 